omni.pipelines.func.stages#

Classes

`AutoboxAndNormalizeStage`([path])	Autobox and normalize stage.
`BrainExtractionStage`([path])	Brain extraction stage.
`CreateReferenceAndMocoStage`([path])	Create reference and moco stage.
`DebiasStage`([path])	Debias stage.
`DeobliqueFuncStage`([path])	Deoblique func stage.

class omni.pipelines.func.stages.AutoboxAndNormalizeStage(path='func_proc_4_autobox_and_normalize', **kwargs)[source]#

Autobox and normalize stage.

Attributes:

args: A dictionary of only the provided input arguments to the stage on construction.
hash_output: Location of hash files for the stage.
input_args: A dictionary of all input arguments to the stage.
inputs: Inputs argument names for the stage.
outputs: Output arguments names for the stage.
results: A dictionary of the output return values for the stage.
state: A flag that specifies whether the current stage has been run (The callable has been executed).

Methods

__init__:

class omni.pipelines.func.stages.BrainExtractionStage(path='func_proc_3_brain_extraction', **kwargs)[source]#

Brain extraction stage.

Attributes:

args: A dictionary of only the provided input arguments to the stage on construction.
hash_output: Location of hash files for the stage.
input_args: A dictionary of all input arguments to the stage.
inputs: Inputs argument names for the stage.
outputs: Output arguments names for the stage.
results: A dictionary of the output return values for the stage.
state: A flag that specifies whether the current stage has been run (The callable has been executed).

Methods

__init__:

class omni.pipelines.func.stages.CreateReferenceAndMocoStage(path='func_proc_1_create_reference_and_moco', **kwargs)[source]#

Create reference and moco stage.

Attributes:

args: A dictionary of only the provided input arguments to the stage on construction.
hash_output: Location of hash files for the stage.
input_args: A dictionary of all input arguments to the stage.
inputs: Inputs argument names for the stage.
outputs: Output arguments names for the stage.
results: A dictionary of the output return values for the stage.
state: A flag that specifies whether the current stage has been run (The callable has been executed).

Methods

__init__:

class omni.pipelines.func.stages.DebiasStage(path='func_proc_2_debias', **kwargs)[source]#

Debias stage.

Attributes:

args: A dictionary of only the provided input arguments to the stage on construction.
hash_output: Location of hash files for the stage.
input_args: A dictionary of all input arguments to the stage.
inputs: Inputs argument names for the stage.
outputs: Output arguments names for the stage.
results: A dictionary of the output return values for the stage.
state: A flag that specifies whether the current stage has been run (The callable has been executed).

Methods

__init__:

class omni.pipelines.func.stages.DeobliqueFuncStage(path='func_proc_0_deoblique_func', **kwargs)[source]#

Deoblique func stage.

Attributes:

args: A dictionary of only the provided input arguments to the stage on construction.
hash_output: Location of hash files for the stage.
input_args: A dictionary of all input arguments to the stage.
inputs: Inputs argument names for the stage.
outputs: Output arguments names for the stage.
results: A dictionary of the output return values for the stage.
state: A flag that specifies whether the current stage has been run (The callable has been executed).

Methods

__init__: