omni.pipelines.anat.normalize#

Functions

debias(output_path, t1_do, t2_do[, spline_fit])

Bias field correction of anatomical images.
omni.pipelines.anat.normalize.debias(output_path: str, t1_do: str, t2_do: str, spline_fit: str = '[100,3,1x1x1,3]')[source]#

Bias field correction of anatomical images.

Parameters:
output_pathstr

Output path to write out files to.

t1_dostr

Deobliqued T1 image.

t2_dostr

Deobliqued T2 image.

spline_fitstr

Custom spline fitting string.

Returns:
str

Bias field corrected/Normalized T1.

str

Bias field corrected/Normalized T2.